Division of Molecular Medicine

Sl.No Title Authors Journal Name Publication Year
1 Identification of BRCA1 Deficiency Using Multi-Analyte Estimation of BRCA1 and Its Repressors in FFPE Tumor Samples from Patients with Triple Negative Breast Cancer Korlimarla A, Prabhu JS, Remacle J, Rajarajan S, Raja U, C E A, Srinath BS, Manjunath S, K S G, Correa M, M S N P, Sridhar TS PLoS One 2016
2 High expression of integrin β6 in association with the Rho-Rac pathway identifies a poor prognostic subgroup within HER2 amplified breast cancers Desai K, Nair MG, Prabhu JS, Vinod A, Korlimarla A, Rajarajan S, Aiyappa R, Kaluve RS, Alexander A, Hari PS, Mukherjee G, Kumar RV, Manjunath S, Correa M, Srinath BS, Patil S, Prasad MS, Gopinath KS, Rao RN, Violette SM, Weinreb PH, Sridhar TS Cancer Med 2016
3 β3 integrin promotes chemoresistance to epirubicin in MDA-MB-231 through repression of the pro-apoptotic protein, BAD Nair MG, Desai K, Prabhu JS, Hari PS, Remacle J, Sridhar TS Exp Cell Res 2016
4 The ethics of research on stored biological samples: outcomes of a Workshop Vaz M, Sridhar TS, Pai SA Indian J Med Ethics 2016
5 Data on alteration of hormone and growth factor receptor profiles over progressive passages of breast cancer cell lines representing different clinical subtypes Nair MG, Desai K, Prabhu JS, Hari PS, Remacle J, Sridhar TS Data Brief 2016
6 Placental expression of the insulin receptor binding protein GRB10: Relation to human fetoplacental growth and fetal gender Mukhopadhyay A, Ravikumar G, Dwarkanath P, Meraaj H, Thomas A, Crasta J, Thomas T, Kurpad AV, Sridhar TS Placenta 2015
7 A Majority of Low (1-10%) ER Positive Breast Cancers Behave Like Hormone Receptor Negative Tumors Prabhu JS, Korlimarla A, Desai K, Alexander A, Raghavan R, Anupama C, Dendukuri N, Manjunath S, Correa M, Raman N, Kalamdani A, Prasad M, Gopinath KS, Srinath BS, Sridhar TS J Cancer 2014
8 Separate quality-control measures are necessary for estimation of RNA and methylated DNA from formalin-fixed, paraffin-embedded specimens by quantitative PCR Korlimarla A, Prabhu JS, Anupama CE, Remacle J, Wahi K, Sridhar TS J Mol Diagn 2014
9 Identification of a non-canonical nuclear localization signal (NLS) in BRCA1 that could mediate nuclear localization of splice variants lacking the classical NLS Korlimarla A, Bhandary L, Prabhu JS, Shankar H, Sankaranarayanan H, Kumar P, Remacle J, Natarajan D, Sridhar TS Cell Mol Biol Lett 2013
10 The epigenetic silencing of the estrogen receptor (ER) by hypermethylation of the ESR1 promoter is seen predominantly in triple-negative breast cancers in Indian women Prabhu JS, Wahi K, Korlimarla A, Correa M, Manjunath S, Raman N, Srinath BS, Sridhar TS Tumour Biology 2012
11 Estrogen Receptor Negative Breast Cancer in India: Do We Really Have Higher Burden of this Subtype? Manjunath S, Prabhu JS, Kaluve R, Correa M, Sridhar TS Indian J Surg Oncol 2011
Sl.No Title Authors Journal Name Publication Year
1 Mass Spectrometry-Based Diagnosis of Hemoglobinopathies: A Potential Tool for the Screening of Genetic Disorder Das R, Mitra G, Mathew B, Bhat V, Ross C, Pal D, Mandal AK Biochem Genet 2016
2 Protein Structure-Function Correlation in Living Human Red Blood Cells Probed by Isotope Exchange-based Mass Spectrometry Narayanan S, Mitra G, Muralidharan M, Mathew B, Mandal AK Anal Chem 2016
3 Characterization of a Double Heterozygote HbE/β(+) Thalassemia IVS 1-1 [G>T] in a Juvenile Diabetic Bhat VS, Lokeshwarappa S, Mandal AK Indian J Clin Biochem 2015
4 MAP2c prevents arachidonic acid-induced fibril formation of tau: Role of chaperone activity and phosphorylation Mitra G, Gupta S, Poddar A, Bhattacharyya B Biophys Chem 2015
5 Mass spectrometry based characterization of Hb Beckman variant in a falsely elevated HbA1c sample Das R, Muralidharan M, Mitra G, Bhat V, Mathew B, Pal D, Ross C, Mandal AK Anal Biochem 2015
6 Automated Analysis of Hemoglobin Variants Using NanoLC-MS and Customized Databases Das R, Mitra G, Mathew B, Ross C, Bhat V, Mandal AK Journal of Proteome Research 2013
7 Glutathionylation induced structural changes in oxy human hemoglobin analyzed by backbone amide hydrogen/deuterium exchange and MALDI-mass spectrometry Mitra G, Muralidharan M, Narayanan S, Pinto J, Srinivasan K, Mandal AK Bioconjugate Chemistry 2012
8 Identification of a Rare Hemoglobin Variant HbJ-Rajappen [alpha90 (FG2) Lys → Thr] Using Mass Spectrometry Bhat VS, Mandal AK, Mathew B Indian Journal of Clinical Biochemistry 2012
9 Glutathionyl hemoglobin is elevated in iron deficiency anemia Shet AS, Pinto SM, Mitra G, Mandal AK Acta Haematologica 2012
10 Analysis of hemoglobin variants using nondenaturing gel electrophoresis and matrix-assisted laser desorption ionization mass spectrometry Mathew B, Bhat V, Mandal AK Analytical Biochemistry 2011
11 Structural Perturbation of Human Hemoglobin on Glutathionylation Probed by Hydrogen-Deuterium Exchange and MALDI Mass Spectrometry Mitra G, Muralidharan M, Pinto J, Srinivasan K, Mandal AK Bioconjugate Chemistry 2011
12 Characterization of a hemoglobin variant: HbQ-India / IVS 1-1 [G>T]-β-thalassemia Bhat VS, Dewan KK, Krishnaswamy PR, Mandal AK, Balaram P Indian Journal of Clinical Biochemistry 2010
13 Analysis of protein posttranslational modifications by mass spectrometry: With special reference to haemoglobin Woodi M, Mondal AK, Padmanabhan B, Rajagopalan KP Indian Journal of Clinical Biochemistry 2009
Sl.No Title Authors Journal Name Publication Year
1 What accounts for ethnic differences in newborn skinfold thickness comparing South Asians and white Caucasians? Findings from the START and FAMILY birth cohorts Anand SS, Gupta MK, Schulze KM, Desai D, Abdalla N, Wahi G, Wade C, Scheufler P, McDonald SD, Morrison KM, Vasudevan A, Dwarakanath P, Srinivasan K, Kurpad A, Gerstein HC, Teo KK Int J Obes (Lond) 2015
2 Acute Kidney Injury in children: Look for It and Don’t Ignore It! Vasudevan A, Phadke KD Indian Pediatrics 2012
3 Management of Acute Kidney Injury Kumar G, Vasudevan A Indian Journal of Pediatrics 2012
4 TNF α pathway blockade ameliorates effects of FSGS plasma on podocyte cytoskeleton and β3 integrin activation Bitzan M, Babayeva S, Vasudevan A, Goodyer P, Torban E Pediatric Nephrology 2012
5 NPHS2 mutations in Indian children with sporadic early steroid resistant nephrotic syndrome Vasudevan A, Siji A, Raghavendra A, Sridhar TS, Phadke KD Indian Pediatrics 2012
6 Modality of choice for renal replacement therapy for children with acute kidney injury: Results of a survey Vasudevan A, Iyengar A, Phadke KD Indian Journal of Nephrology 2011
7 Evaluation of High Resolution Melting analysis as an alternate tool to screen for risk alleles associated with small kidneys in Indian newborns Raghavendra A, Siji A, Sridhar TS, Phadke K, Vasudevan A BMC Nephrology 2011
Sl.No Title Authors Journal Name Publication Year
1 Cost-efficient HIV-1 drug resistance surveillance using multiplexed high-throughput amplicon sequencing: Implications for use in low- and middle-income countries Ekici H, Rao SD, Sönnerborg A, Ramprasad VL, Gupta R, Neogi U J Antimicrob Chemother 2014
2 Cancer research in India: national priorities, global results. Sullivan R, Badwe RA, Rath GK, Pramesh CS, Shanta V, Digumarti R, D'Cruz A, Sharma SC, Viswanath L, Shet A, Vijayakumar M, Lewison G, Chandy M, Kulkarni P, Bardia MR, Kumar S, Sarin R, Sebastian P, Dhillon PK, Rajaraman P, Trimble EL, Aggarwal A, Vijaykum Lancet Oncol 2014
3 Limited evolution but increasing trends of primary non-nucleoside reverse transcriptase inhibitor resistance mutations in therapy-naive HIV-1-infected individuals in India Neogi U, Gupta S, Palchaudhuri R, Rao SD, Shastri S, Diwan V, Laishram RS, De Costa A, Shet A Antivir Ther 2014
4 HIV-1 coreceptor tropism in India: increasing proportion of X4-tropism in subtype C strains over two decades Gupta S, Neogi U, Srinivasa H, Banerjea AC, Shet A J Acquir Immune Defic Syndr 2014
5 Genetic architecture of HIV type 1 Nef and Tat from HLA-B57-typed long-term survivors in an Indian cohort of perinatally HIV-infected children Neogi U, Palchaudhuri R, Bommana S, Shet A AIDS Res Hum Retroviruses 2013
6 The prevalence and etiology of anemia among HIV-infected children in India Shet A, Arumugam K, Rajagopalan N, Dinakar C, Krishnamurthy S, Mehta S, Shet AS Eur J Pediatr 2012
7 Transient aplastic crisis in hereditary elliptocytosis Kapavarapu PK, Paul A, Lalitha AV, Shet AS Indian J Pediatr 2012
8 Glutathionyl hemoglobin is elevated in iron deficiency anemia Shet AS, Pinto SM, Mitra G, Mandal AK Acta Haematol 2012
9 Cancer mortality in India: a nationally representative survey Dikshit R, Gupta PC, Ramasundarahettige C, Gajalakshmi V, Aleksandrowicz L, Badwe R, Kumar R, Roy S, Suraweera W, Bray F, Mallath M, Singh PK, Sinha DN, Shet AS, Gelband H, Jha P; Million Death Study Collaborators Lancet 2012
10 Paraneoplastic multicentric reticulohistiocytosis: a clinicopathologic challenge Tirumalae R, Rout P, Jayaseelan E, Shet A, Devi S, Kumar KR Indian J Dermatol Venereol Leprol 2011
11 Factors influencing receipt of iron supplementation by young children and their mothers in rural India: local and national cross-sectional studies Pasricha SR, Biggs BA, Prashanth NS, Sudarshan H, Moodie R, Black J, Shet A BMC Public Health 2011
12 Vitamin B-12, folate, iron, and vitamin A concentrations in rural Indian children are associated with continued breastfeeding, complementary diet, and maternal nutrition Pasricha SR, Shet AS, Black JF, Sudarshan H, Prashanth NS, Biggs BA Am J Clin Nutr 2011
13 Determinants of anemia among young children in rural India Pasricha SR, Black J, Muthayya S, Shet A, Bhat V, Nagaraj S, Prashanth NS, Sudarshan H, Biggs BA, Shet AS Pediatrics 2010
14 A community based field research project investigating anaemia amongst young children living in rural Karnataka, India: a cross sectional study Pasricha SR, Vijaykumar V, Prashanth NS, Sudarshan H, Biggs BA, Black J, Shet A BMC Public Health 2009
15 Risks of routine iron and folic acid supplementation for young children Pasricha S, Shet A, Sachdev HP, Shet AS Indian Pediatr 2009

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