Publications

Sl No. Title Authors Journal Name Publication Year
1 Viral evolution in the cell-associated HIV-1 DNA during early ART can lead to drug resistance and virological failure in children Gopalan BP, D'Souza RR, Rajnala N, Arumugam K, Dias M, Ranga U, Shet A J Med Virol 2019
2 Tuberculosis notification in a private tertiary care teaching hospital in South India: a mixed-methods study Siddaiah A, Ahmed MN, Kumar AMV, D'Souza G, Wilkinson E, Maung TM, Rodrigues R BMJ Open 2019
3 Evidence for highly variable, region-specific patterns of T-cell epitope mutations accumulating in Mycobacterium tuberculosis strains Ramaiah A, Nayak S, Rakshit S, Manson AL, Abeel T, Shanmugam S, Sahoo PN, John AJUK, Sundaramurthi JC, Narayanan S, D'Souza G, von Hoegen P, Ottenhoff THM, Swaminathan S, Earl AM, Vyakarnam A Front Immunol 2019
4 Increased monocyte activation with age among HIV-infected long term non-progressor children: implications for early treatment initiation D'Souza RR, Gopalan BP, Rajnala N, Phetsouphanh C, Shet A HIV Med 2019
5 Analysis of dengue specific memory B cells, neutralizing antibodies and binding antibodies in healthy adults from India Gunisetty S, Nayak K, Chandra Rai R, Chawla Y, Reddy ES, Aggarwal C, Maheshwari D, Panda H, Ansari NA, Singh P, Kaur M, Dixit K, Sharma P, Bhatnagar P, Priyamvada L, Bhaumik SK, Ahamed SF, Vivek R, Ray P, Shet A, Coshic P, Lodha R, Kabra SK, Afroze D, Yousuf A, Ahmed R, Murali-Krishna K, Chandele A Int J Infect Dis 2019
6 Emergence of new genotypes and lineages of dengue viruses during the 2012-15 epidemics in southern India Ahamed SF, Rosario V, Britto C, Dias M, Nayak K, Chandele A, Kaja MK, Shet A Int J Infect Dis 2019
7 Nitrothiophene carboxamides, a novel narrow spectrum antibacterial series: Mechanism of action and Efficacy Hameed PS, Bharatham N, Katagihallimath N, Sharma S, Nandishaiah R, Shanbhag AP, Thomas T, Narjari R, Sarma M, Bhowmik P, Amar P, Ravishankar R, Jayaraman R, Muthan K, Subbiah R, Ramachandran V, Balasubramanian V, Datta S Sci Rep 2018
8 Circulating HLA-DR+CD4+ effector memory T cells resistant to CCR5 and PD-L1 mediated suppression compromise regulatory T cell function in tuberculosis Ahmed A, Adiga V, Nayak S, Uday Kumar JAJ, Dhar C, Sahoo PN, Sundararaj BK, Souza GD, Vyakarnam A PLoS Pathog 2018
9 Seasonal prevalence of antibiotic-resistant bacteria in the river Mula-Mutha, India Dhawde R, Macaden R, Ghadge A, Birdi T Environ Monit Assess 2018
10 Incidence of tuberculosis and the influence of surveillance strategy on tuberculosis case-finding and all-cause mortality: a cluster randomised trial in Indian neonates vaccinated with BCG Jenum S, Sumithra S, Nelson J, Christian R, Anneke C H, Vicky C, Esther L, Mark DT, Harleen M S G, Mario V BMJ Open Respir Res 2018
11 High Abundance of genus Prevotella in the gut of perinatally HIV-infected children is associated with IP-10 levels despite therapy Kaur US, Shet A, Rajnala N, Gopalan BP, Moar P, D H, Singh BP, Chaturvedi R, Tandon R Sci Rep 2018
12 Novel transcriptional signatures for sputum-independent diagnostics of tuberculosis in children Gjøen JE, Jenum S, Sivakumaran D, Mukherjee A, Macaden R, Kabra SK, Lodha R, Ottenhoff THM, Haks MC, Doherty TM, Ritz C, Grewal HMS Sci Rep 2017
13 Enhancing the sensitivity of Dengue virus serotype detection by RT-PCR among infected children in India Ahamed SF, Vivek R, Kotabagi S, Nayak K, Chandele A, Kaja MK, Shet A J Virol Methods 2017
14 Evaluation of a pan-serotype point-of-care rapid diagnostic assay for accurate detection of acute dengue infection Vivek R, Ahamed SF, Kotabagi S, Chandele A, Khanna I, Khanna N, Nayak K, Dias M, Kaja MK, Shet A Diagn Microbiol Infect Dis 2017
15 Circulating Mycobacterium tuberculosis DosR latency antigen-specific, polyfunctional, regulatory IL10+ Th17 CD4 T-cells differentiate latent from active tuberculosis Rakshit S, Adiga V, Nayak S, Sahoo PN, Sharma PK, van Meijgaarden KE, Uk J AJ, Dhar C, Souza GD, Finak G, De Rosa SC, Ottenhoff THM, Vyakarnam A Sci Rep 2017