Publications

Sl No. Title Authors Journal Name Publication Year
1 The impact of breast cancer on the patient and the family in Indian perspective Alexander A, Kaluve R, Prabhu JS, Korlimarla A, Srinath BS, Manjunath S, Patil S, Gopinath KS, Sridhar TS Indian J Palliat Care 2019
2 Placental expression of angiogenesis-related genes and their receptors in IUGR pregnancies: correlation with fetoplacental and maternal parameters Ravikumar G, Mukhopadhyay A, Mani C, Kocchar P, Crasta J, Thomas T, Dwarkanath P, Thomas A, Kurpad AV, Sridhar TS J Matern Fetal Neonatal Med 2019
3 Progress in psycho-oncology with special reference to developing countries Murthy RS, Alexander A Curr Opin Psychiatry 2019
4 Eccentric placentae have reduced surface area and are associated with lower birth weight in babies small for gestational age Ravikumar G, Crasta J, Prabhu JS, Thomas T, Dwarkanath P, Thomas A, Sridhar TS, Kurpad AV J Dev Orig Health Dis 2018
5 The role of circulating microRNA in the regulation of beta cell function and insulin resistance among Indians with type 2 diabetes Sucharita S, Ashwini V, Prabhu JS, Avadhany ST, Ayyar V, Bantwal G Indian J Endocrinol Metab 2018
6 HR+HER2- breast cancers with growth factor receptor-mediated EMT have a poor prognosis and lapatinib downregulates EMT in MCF-7 cells Desai K, Aiyappa R, Prabhu JS, Nair MG, Lawrence PV, Korlimarla A, CE Anupama, Alexander A, Kaluve RS, Manjunath S, Correa M, Srinath BS, Patil S, Kalamdani A, Prasad M, Sridhar TS Tumour Biology 2017
7 Dissecting the Biological Heterogeneity within Hormone Receptor Positive HER2 Negative Breast Cancer by Gene Expression Markers Identifies Indolent Tumors within Late Stage Disease Prabhu JS, Korlimarla A, Anupama CE, Alexander A, Raghavan R, Kaul R, Desai K, Rajarajan S, Manjunath S, Correa M, Raman R, Kalamdani A, Prasad M, Patil S, Gopinath KS, Srinath BS, Sridhar TS Translational Oncology 2017
8 NLScore: a novel quantitative algorithm based on 3 dimensional structural determinants to predict the probability of nuclear localization in proteins containing classical nuclear localization signals Hari PS, Sridhar TS, Kumar RP Journal of Molecular Modeling 2017
9 CD15 as a marker of fetoplacental endothelial immaturity in IUGR placentas Ravikumar G, Crasta J, Prabhu JS, Thomas T, Dwarkanath P, Thomas A, Kurpad AV, Sridhar TS J Matern Fetal Neonatal Med 2017
10 Identification of BRCA1 Deficiency Using Multi-Analyte Estimation of BRCA1 and Its Repressors in FFPE Tumor Samples from Patients with Triple Negative Breast Cancer Korlimarla A, Prabhu JS, Remacle J, Rajarajan S, Raja U, C E A, Srinath BS, Manjunath S, K S G, Correa M, M S N P, Sridhar TS PLoS One 2016
11 High expression of integrin beta6 in association with the Rho-Rac pathway identifies a poor prognostic subgroup within HER2 amplified breast cancers Desai K, Nair MG, Prabhu JS, Vinod A, Korlimarla A, Rajarajan S, Aiyappa R, Kaluve RS, Alexander A, Hari PS, Mukherjee G, Kumar RV, Manjunath S, Correa M, Srinath BS, Patil S, Prasad MS, Gopinath KS, Rao RN, Violette SM, Weinreb PH, Sridhar TS Cancer Medicine 2016
12 Beta3 integrin promotes chemoresistance to epirubicin in MDA-MB-231 through repression of the pro-apoptotic protein, BAD Nair MG, Desai K, Prabhu JS, Hari PS, Remacle J, Sridhar TS Experimental Cell Research 2016
13 The ethics of research on stored biological samples: outcomes of a Workshop Vaz M, Sridhar TS, Pai SA Indian J Med Ethics 2016
14 Data on alteration of hormone and growth factor receptor profiles over progressive passages of breast cancer cell lines representing different clinical subtypes Nair MG, Desai K, Prabhu JS, Hari PS, Remacle J, Sridhar TS Data in Brief 2016
15 Analysis of Clinico-Pathological Characteristics of Indian Breast CancersShows Conservation of Specific Features in the Hormone Receptor Sub-Types Mukherjee G, Lakshmaiah KC, Vijayakumar M, Prabhu JS, Telikicherla D, Sridhar TS, Kumar RV Journal of Integrative Oncology 2016
Sl No. Title Authors Journal Name Publication Year
1 Glycation profile of minor abundant erythrocyte proteome across varying glycemic index in diabetes mellitus Muralidharan M, Bhat V, Bindu YS, Mandal AK Anal Biochem 2019
2 Understanding molecular features of aggregation-resistant tau conformer using oxidized monomer Jebarupa B, Mathew B, Srinivasu BY, Sasikumaran A, Joseph S, Mandal AK, Thomas T, Mitra G Biochim Biophys Acta Gen Subj 2019
3 Elevated levels of glutathionyl haemoglobin as an oxidative stress marker in patients with major depressive disorder Mathew B, Srinivasan K, Johnson P, Thomas T, Mandal AK Indian J Med Res 2019
4 Application of native mass spectrometry in studying intrinsically disordered proteins: A special focus on neurodegenerative diseases Mitra G Biochim Biophys Acta Proteins Proteom 2019
5 Structural analysis of glycated human hemoglobin using native mass spectrometry Muralidharan M, Bhat V, Mandal AK FEBS J 2019
6 Suicidal behaviour is associated with decreased esterified cholesterol in plasma and membrane fluidity of platelets Mathew B, Srinivasan K, Pradeep J, Thomas T, Mandal AK Asian J Psychiatr 2018
7 Analysis of the Quaternary Structure of Hemoglobin Beckman Variant and Molecular Interpretation of Its Functional Abnormality: A Mass-Spectrometry-Based Approach Muralidharan M, Das R, Bhat V, Mandal AK Chembiochem 2018
8 Homologs from sulfur oxidation (Sox) and methanol dehydrogenation (Xox) enzyme systems collaborate to give rise to a novel pathway of chemolithotrophic tetrathionate oxidation Pyne P, Alam M, Rameez MJ, Mandal S, Sar A, Mondal N, Debnath U, Mathew B, Misra AK, Mandal AK, Ghosh W Mol Microbiol 2018
9 Effect of altered solution conditions on tau conformational dynamics: Plausible implication on order propensity and aggregation Jebarupa B, Muralidharan M, Srinivasu BY, Mandal AK, Mitra G Biochim Biophys Acta 2018
10 Molecular insights of inhibition in sickle hemoglobin polymerization upon glutathionylation: hydrogen/deuterium exchange mass spectrometry and molecular dynamics simulation based approach Das R, Mitra A, Mitra G, Maity D, Bhat V, Pal D, Ross C, Kurpad AV, Mandal AK Biochem J 2018
11 Conjugation of para-benzoquinone of Cigarette Smoke with Human Hemoglobin Leads to Unstable Tetramer and Reduced Cooperative Oxygen Binding Mitra A, Mandal AK J Am Soc Mass Spectrom 2018
12 Effect of ascorbic acid rich, micro-nutrient fortified supplement on the iron bioavailability of ferric pyrophosphate from a milk based beverage in Indian school children Pauline, M, Verghese ST, Srinivasu BY, Bose B, Thomas T, Mandal AK, Thankachan P, Kurpad AV Asia Pac J Clin Nutr 2018
13 Conformational heterogeneity of tau: Implication on intrinsic disorder, acid stability and fibrillation in Alzheimer's disease Jebarupa B, Muralidharan M, Arun A, Mandal AK, Mitra G Biophys Chem 2018
14 Characterization of residue-specific glutathionylation of CSF proteins in multiple sclerosis - A MS-based approach Srivastava D, Kukkuta Sarma GR, Dsouza DS, Muralidharan M, Srinivasan K, Mandal AK Anal Biochem 2018
15 Application of isotope exchange based mass spectrometry to understand the mechanism of inhibition of sickle hemoglobin polymerization upon oxygenation Das R, Mitra A, Bhat V, Mandal AK J Struct Biol 2017
16 Adsorption Induced Changes of Human Hemoglobin on Ferric Pyrophosphate Nanoparticle Surface Probed by Isotope Exchange Mass Spectrometry: An Implication on Structure-Function Correlation Srinivasu BY, Bose B, Mitra G, Kurpad AV, Mandal AK Langmuir 2017
17 Assessment of Cysteine Reactivity of Human Hemoglobin at Its Residue Level: A Mass Spectrometry-Based Approach Mitra A, Muralidharan M, Srivastava D, Das R, Bhat V, Mandal AK Hemoglobin 2017
18 Analysis of Isotopic Peaks in Hydrogen/Deuterium Exchange Mass Spectra for Precise Measurement of Isotope Average Centroid Mass of Peptides and Proteins Using R Programming Language Arun A, Narayanan S, Sarangi S, Mandal AK International Journal of Biochemistry Research & Review 2017
19 Mass Spectrometry-Based Diagnosis of Hemoglobinopathies: A Potential Tool for the Screening of Genetic Disorder Das R, Mitra G, Mathew B, Bhat V, Ross C, Pal D, Mandal AK Biochem Genet 2016
20 Protein Structure-Function Correlation in Living Human Red Blood Cells Probed by Isotope Exchange-based Mass Spectrometry Narayanan S, Mitra G, Muralidharan M, Mathew B, Mandal AK Anal Chem 2016
21 Interaction of p-benzoquinone with hemoglobin in smoker's blood causes alteration of structure and loss of oxygen binding capacity Ghosh A, Banerjee S, Mitra A, Muralidharan M, Roy B, Banerjee R, Mandal AK, Chatterjee IB Toxicol Rep 2016
22 MAP2c prevents arachidonic acid-induced fibril formation of tau: Role of chaperone activity and phosphorylation Mitra G, Gupta S, Poddar A, Bhattacharyya B Biophys Chem 2015
23 Mass spectrometry based characterization of Hb Beckman variant in a falsely elevated HbA1c sample Das R, Muralidharan M, Mitra G, Bhat V, Mathew B, Pal D, Ross C, Mandal AK Anal Biochem 2015
24 Characterization of a Double Heterozygote HbE/beta(+) Thalassemia IVS 1-1 [G>T] in a Juvenile Diabetic Bhat VS, Lokeshwarappa S, Mandal AK Indian J Clin Biochem 2015
25 Beneficiary effect of nanosizing ferric pyrophosphate as food fortificant in iron deficiency anemia: evaluation of bioavailability, toxicity and plasma biomarker Srinivasu B, Mitra G, Muralidharan M, Srivastava D, Pinto J, Thankachan P, Suresh S, Shet A, Rao S, Ravikumar G, Thomas T, Kurpad AV, Mandal AK RSC Advances 2015
26 Automated Analysis of Hemoglobin Variants Using NanoLC-MS and Customized Databases Das R, Mitra G, Mathew B, Ross C, Bhat V, Mandal AK Journal of Proteome Research 2013
27 Identification of a Rare Hemoglobin Variant HbJ-Rajappen [alpha90 (FG2) Lys ? Thr] Using Mass Spectrometry Bhat VS, Mandal AK, Mathew B Indian Journal of Clinical Biochemistry 2012
28 Glutathionyl hemoglobin is elevated in iron deficiency anemia Shet AS, Pinto SM, Mitra G, Mandal AK Acta Haematologica 2012
29 Glutathionylation induced structural changes in oxy human hemoglobin analyzed by backbone amide hydrogen/deuterium exchange and MALDI-mass spectrometry Mitra G, Muralidharan M, Narayanan S, Pinto J, Srinivasan K, Mandal AK Bioconjugate Chemistry 2012
30 Analysis of hemoglobin variants using nondenaturing gel electrophoresis and matrix-assisted laser desorption ionization mass spectrometry Mathew B, Bhat V, Mandal AK Analytical Biochemistry 2011
31 Structural perturbation of human hemoglobin on glutathionylation probed by hydrogen-deuterium exchange and MALDI mass spectrometry Mitra G, Muralidharan M, Pinto J, Srinivasan K, Mandal AK Bioconjugate Chemistry 2011
32 Characterization of a hemoglobin variant: HbQ-India / IVS 1-1 [G>T]-beta-thalassemia Bhat VS, Dewan KK, Krishnaswamy PR, Mandal AK, Balaram P Indian Journal of Clinical Biochemistry 2010
33 Analysis of protein posttranslational modifications by mass spectrometry: With special reference to haemoglobin Woodi M, Mondal AK, Padmanabhan B, Rajagopalan KP Indian Journal of Clinical Biochemistry 2009
Sl No. Title Authors Journal Name Publication Year
1 Role of Genetic Screening in the Management of Familial Focal Segmental Glomerulosclerosis: A Tale of Two Sisters Siji A, Iyengar A, Vasudevan A Indian J Nephrol 2019
2 Targeted gene panel for genetic testing of south Indian children with steroid resistant nephrotic syndrome Siji A, Karthik KN, Pardeshi VC, Hari PS, Vasudevan A BMC Med Genet 2018
3 Screening of WT1 mutations in exon 8 and 9 in children with steroid resistant nephrotic syndrome from a single centre and establishment of a rapid screening assay using high-resolution melting analysis in a clinical setting Siji A, Pardeshi VC, Ravindran S, Vasudevan A, Vasudevan A BMC Medical Genetics 2017
4 NLScore: a novel quantitative algorithm based on 3 dimensional structural determinants to predict the probability of nuclear localization in proteins containing classical nuclear localization signals Hari PS, Sridhar TS, Kumar RP J Mol Model 2017
5 What accounts for ethnic differences in newborn skinfold thickness comparing South Asians and white Caucasians? Findings from the START and FAMILY birth cohorts Anand SS, Gupta MK, Schulze KM, Desai D, Abdalla N, Wahi G, Wade C, Scheufler P, McDonald SD, Morrison KM, Vasudevan A, Dwarakanath P, Srinivasan K, Kurpad A, Gerstein HC, Teo KK Int J Obes (Lond) 2015
6 TNF ? pathway blockade ameliorates effects of FSGS plasma on podocyte cytoskeleton and ?3 integrin activation Bitzan M, Babayeva S, Vasudevan A, Goodyer P, Torban E Pediatric Nephrology 2012
7 NPHS2 mutations in Indian children with sporadic early steroid resistant nephrotic syndrome Vasudevan A, Siji A, Raghavendra A, Sridhar TS, Phadke KD Indian Pediatrics 2012
8 Acute Kidney Injury in children: Look for It and Don’t Ignore It! Vasudevan A, Phadke KD Indian Pediatrics 2012
9 Management of Acute Kidney Injury Kumar G, Vasudevan A Indian Journal of Pediatrics 2012
10 Modality of choice for renal replacement therapy for children with acute kidney injury: Results of a survey Vasudevan A, Iyengar A, Phadke KD Indian Journal of Nephrology 2011
11 Evaluation of High Resolution Melting analysis as an alternate tool to screen for risk alleles associated with small kidneys in Indian newborns Raghavendra A, Siji A, Sridhar TS, Phadke K, Vasudevan A BMC Nephrology 2011
Sl No. Title Authors Journal Name Publication Year
1 Stromal cells downregulate miR-23a-5p to activate protective autophagy in acute myeloid leukemia Ganesan S, Palani HK, Lakshmanan V, Balasundaram N, Alex AA, David S, Venkatraman A, Korula A, George B, Balasubramanian P, Palakodeti D, Vyas N, Mathews V Cell Death Dis 2019
2 Wnt and Hedgehog: Secretion of Lipid-Modified Morphogens Parchure A, Vyas N, Mayor S Trends Cell Biol 2018
3 Exosomes: mobile platforms for targeted and synergistic signaling across cell boundaries Vyas N, Dhawan J Cell Mol Life Sci 2017